What to Do When There’s a Dead Fish in Your Tank?


Here’s a scenario for you: you do your due diligence as an aquarist and enjoy a happy aquarium for some time.

But now you wake up to find a dead pet fish in your tank and you have no idea what to do in that situation.

If it was one of the many tank inhabitants, the fish could have died days ago without you noticing that it’s missing.

Should you go ahead and dispose of the fish or just leave it there for nature to take its natural course?

What steps should you take after one of your aquarium fish dies?

What should you do when you discover a dead fish in your tank?

A dead fish should be removed from its tank immediately after you’ve found out about the incident. This is because when a fish dies it starts to decompose right away, which could foul the water in the aquarium. The polluted water may then kill the other fish in the tank.

A decomposing fish will release large amounts of Ammonia in the water.

High levels of Ammonia are dangerous to the other fish in the tank and may poison them, making the aquarium inhabitable.

There’s also another reason to never leave the corpse of a fish in the aquarium for days:

When a fish dies in the aquarium, it will likely get eaten by the other inhabitants in the tank after some time.

If the fish died from a disease, the corpse poses a health risk to the animals that consume it.

5 steps to take when a fish dies in your aquarium

There are a couple of simple steps that every aquarist should take when a fish dies in their aquarium.

This is done to prevent further fish deaths.

1. Remove the corpse of the fish from the tank.

Use a fish net such as this or a similar one to remove the corpse of the dead fish (here’s another option to check on Amazon).

Try not to use your hands as you still don’t know what the fish has died from.

If you do happen to use your hands, wash them thoroughly after.

If the fish has just disappeared and you can’t find its corpse in sight it could mean one of three things:

  • The fish has gone missing because it is actually hiding or stuck somewhere.
  • The other fish have already eaten the corpse.
  • The fish has jumped out of the water and is nearby.

If you have a community aquarium with carnivorous fish in it , it is likely that they took the opportunity to feast on the victim.

If you keep a lot of nano fish then the aquarium filter’s intake could be at fault here.

Most of the canister filters used in larger aquariums would be strong enough to suck a small fish in their intake, if there’s no barrier on the filter’s inlet.

Anyway, once found, I recommend putting the corpse of your pet fish in a plastic box or a bag and storing it in the freezer before you decide how to dispose of the body.

2. Test the aquarium water for raised Ammonia levels.

The size of your fish tank determines how fast its water will get polluted if a dead fish is left in there to rot.

A small fish decomposing in a 30-gallon aquarium will likely take a whole day before the water becomes foul.

However, a fish that has died in a 5-gallon tank could pollute its water almost immediately.

Here’s how Ammonia levels are tied to a dead fish:

In a healthy aquarium system, a set of beneficial bacteria will take care of the Ammonia that gets released in the water with decomposing fish waste. When a fish dies, however, its body starts to release so much Ammonia that the bacteria do not have enough time to expand to process it all in time. These bacteria are slow in expanding their colony fast enough and the other fish start to suffer from the poisoning effects of the excess Ammonia in the water.

A good visual sign that the body of the fish has been too long in the tank is the aquarium water becoming cloudy.

This is due to a bacterial bloom of another set of bacteria, responsible for turning the rotting flesh into Ammonia (these are not the beneficial bacteria I mentioned above).

Anyway, what you would want to do after removing the dead fish from the aquarium is to test the water inside.

You’ll need to use a liquid test kit because water test strips are notorious for being inaccurate.

Liquid water test kits will help you make a precise estimation of how polluted the water has become and is it dangerous to the other fish in the tank.

A liquid water test kit will let you know if you should clean the aquarium further or change its water.

Here’s how the water parameters of a safe aquarium environment look like in parts per million (ppm):

Aquarium water with these test readings is safe for the addition of new fish and for the ones that are already inside.

However, even 0.5 ppm of Ammonia could burn the gills of the fish in the aquarium.

Low levels of Nitrite are also harmful to freshwater fish. A test strip will not be able to give an accurate enough estimation of that.

If you don’t own a liquid water test kit you could get the API Master Kit which can test for all of the above parameters and is the preferred choice by most fish keepers.

You can either rush to the fish store to get one or make a next-day order online.

If you find that the water parameters are off, move on to the next step.

3. Change a portion of the contaminated water.

The quickest way to rid your aquarium of pollution is to exchange a portion of its water.

Cleaning the whole tank is not necessary, but you’ll want to remove what contaminants may have leached into the water.

Following the results of your test kit, you should be able to estimate how much water needs to be changed.

For example, changing 50% of the water will remove 50% of the Ammonia.

You’ll want to bring down the Ammonia levels to below 0.25 ppm.

If it turns out that you need to remove more than 20% of the water, I recommend changing the needed volume in intervals and not all at once.

This is because large water changes may too become the cause behind a dead fish. Visit the link to learn why a fish may actually die after a water change.

Anyway, to avoid stressing your fish further, change 10% of the water every hour or so. This will give the fish time to adjust to the changing environment without stressing them.

If the Ammonia levels are too high (2 ppm or above) you can change more than that, but be prepared to witness some stressed fish.

The easiest and fastest way to perform a water change in a fish tank is with a syphon designed for that.

4. Pour in a beneficial bacteria starter in the tank.

In any case, when there’s elevated Ammonia in the aquarium I would recommend using a beneficial bacteria booster after you change the polluted water.

These products contain live beneficial bacteria that convert Ammonia into harmless substances and may help immensely in such situations.

Using one will help the beneficial bacteria in your aquarium to establish their colonies faster, which will consequently take care of the pollution.

You should know which brand works though because some manufacturers do not use the right set of bacteria making some of these products rather useless.

To save you some time for research I can point you to one brand that I’m happy with – Tetra’s SafeStart Plus.

I’ve had amazing results with this bacteria starter and it’s my go-to when I need to kick-start the Nitrogen cycle in a new aquarium or when an old tank experiences an Ammonia spike.

I’ve also listed a couple of other sound bacteria starter choices in my guide that you can find by clicking the link.

5. Investigate the cause of death.

If there were no issues with the quality of the tank’s water before the fish died, then you should investigate what caused the death of the pet.

Common reasons for fish deaths in an aquarium, besides polluted water, are:

  • Aggression and injuries from other tank mates.
  • Thermal shock caused by a sudden shift in water temperature.
  • Deadly fish diseases.
  • Injuries from sharp decorations.
  • Any form of stress.
  • Using chlorinated water by mistake.
  • Old age.

You could inspect the corpse of the fish for any injuries such as rigged fins and bite marks to rule out aggressive tank mates.

This is also the way to tell if the fish was ill before dying.

Does the body of the fish have small white spots that were not there before that?

How about other patches of discoloration.

Is its belly unnaturally bloated?

Are the scales of the fish in place?

Suggested read: What Causes a Betta Fish to Become Bloated

On the other hand, it’s very easy to eliminate thermal shock as a possible reason if you have an aquarium thermometer that’s properly calibrated.

What’s important here is to check the difference in the water temperature during the day and the night.

A 2 to 3 degrees shift may prove stressful to most tropical fish.

Even cold water and subtropical fish can’t tolerate sudden drops of water temperature.

Also, be sure that the fish was kept in an environment that was not stressing it to the point of death.

Schooling fish, for example, should be kept in groups of at least 6 to feel happy and form their natural social hierarchy.

Is it possible that your aquarium was too small for the fish in the first place? There is just a handful of fish that could comfortably live in a 5-gallon tank.

And finally, small fish usually have a shorter life span and die more often from old age, than larger species.

The larger the fish that died, the smaller the chance it has passed away from old age.

How to dispose of a dead pet fish?

I’ve found that there are 2 reasonable ways to dispose of a dead fish.

Before we continue, flushing it down the drain is possible, but not really recommended.

Flushing a fish that has died from a disease poses a risk to the local ecosystem because some drains lead to rivers or the ocean.

Anyway, the best way to dispose of a small dead fish would be putting it in a ziplock bag and throwing it in the bin.

The ziplock bag will keep the smell at a minimum and may prevent wild animals from getting their paws on it.

The ziplock bag disposal method is for those of you who are in a hurry (and likely the parents of a soon-to-be-upset child).

However, what I actually recommend is to bury your pet fish which, in my opinion, is a better way to say goodbye to your friend.

Just make sure you bury it at least 2 to 3 feet deep as this way there will be no foul smell and wild cats or other animals won’t be encouraged to dig it out.

There are biodegradable fish coffins at Amazon which you may want to check if your fish was no more than 4 inches in full body length.

These coffins are made of bamboo, rice and corn will fully degrade in 3 to 5 years.

Anyway, burying is what you should also go for if your fish was larger.

It feels somewhat uncomfortable to toss your large fish buddy in the trash bin.

Is it normal for fish to die in a new aquarium?

Fish should not die in a new aquarium as long as the beneficial bacteria in the water have developed a colony.

A tank that’s ready to house fish is called “cycled” because it has an established Nitrogen cycle.

Ammonia, Nitrite, and Nitrate are all Nitrogen compounds that are harmful to fish.

However, these compounds get converted to less harmful substances by the beneficial bacteria in the aquarium’s water.

To make sure that your new fish doesn’t end up dead again, just follow these 2 simple rules:

  • The aquarium should remain cycled at all times.
  • There shouldn’t be any sudden changes in the water’s parameters.

An easy way to follow the first rule is to always have a beneficial bacteria starter at hand.

You could add small doses each time you add new fish to the tank or when you clean the substrate and filter media.

An easy way to follow the second rule would be to have a reliable aquarium heater and a couple of aquarium plants to help with cleaning the water from excess organic waste.

Surface aquarium plants, for example, are a really good way to keep the water in the tank clean and stable.

Share your story with the rest of the Aquanswers blog’s readers in the comments and tell us how it all went.

Sharing is caring!

This site uses Akismet to reduce spam. Learn how your comment data is processed.

  Subscribe  
Notify of